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SRX25672484: RNA-seq of MEAM1 Bemisia tabaci: adult treated at 38 degree
1 ILLUMINA (Illumina NovaSeq 6000) run: 21.7M spots, 6.4G bases, 2.2Gb downloads

Design: After total RNA was extracted, mRNA was purified using Dynabeads Oligo (dT) with two rounds of purification and then was fragmented into short fragments. The cleaved RNA fragments were reverse-transcribed to create the cDNA by SuperScriptII Reverse Transcriptase. Dual-index adapters were ligated to the fragments, and size selection was performed with AMPureXP beads. The ligated products were amplified with PCR.
Submitted by: Zhejiang University
Study: Effect of heat stress on TYLCV-whitefly interaction
show Abstracthide Abstract
High temperature tends to be a contributing factor to the spread of vector-born viral disease via enhancing vector competence. However, the underlying mechanisms of increased virus transmission capacity of vectors under heat stress are still largely unknown. Tomato yellow leaf curl virus (TYLCV) is one of the most devastating plant DNA viruses globally and is exclusively transmitted by Bemisia tabaci. Here we identify a transcription factor of whitefly, heat shock factor (HSF), as a key factor to mediate TYLCV accumulation in their vectors under heat stress. Quantitative analysis show that the amount of virion-sense DNA in whiteflies is gradually increased with temperature rising, but complementary-sense DNA abundance is stable under different temperature treatment. Meanwhile, whitefly HSF is identified to interact with the intergenic region of TYLCV by yeast one-hybrid. Dual luciferase analysis further proves the specificity of this interaction. In addition, the variation trend of HSF transcriptional activity coincides with TYLCV accumulation in whiteflies with the increase of temperature. Knocking down HSF in whiteflies cause a significantly decrease of TYLCV DNA and coat protein. Our results reveal an important role of HSF in mediating the virus accumulation in their insect vectors under high temperature and provide insights into how environmental factors affect plant virus-vector interaction.
Sample:
SAMN42913273 • SRS22314531 • All experiments • All runs
Organism: Bemisia tabaci
Library:
Name: HS-38-3
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA_oligo_dT
Layout: SINGLE
Runs: 1 run, 21.7M spots, 6.4G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR3020946021,654,2256.4G2.2Gb2024-08-12

ID:
34693421

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